In [1]:
%run "/code/source/notebooks/notebook_settings.py"
import logging
import numpy as np
import helpsk as hlp
from helpsk.utility import read_pickle, Timer
from helpsk.sklearn_eval import MLExperimentResults

import source.config.config as config
from source.service.model_registry import ModelRegistry

logging.info("Running experiment notebook for last run.")
2023-11-10 07:25:26 - INFO     | Running experiment notebook for last run.

Get Latest Experiment Run from MLFlow¶

In [2]:
registry = ModelRegistry(tracking_uri=config.experiment_server_url())
experiment = registry.get_experiment_by_name(exp_name=config.experiment_name())
logging.info(f"Experiment id: {experiment.last_run.exp_id}")
logging.info(f"Experiment name: {experiment.last_run.exp_name}")
logging.info(f"Run id: {experiment.last_run.run_id}")
logging.info(f"Metric(s): {experiment.last_run.metrics}")
2023-11-10 07:25:26 - INFO     | Experiment id: 1
2023-11-10 07:25:26 - INFO     | Experiment name: credit
2023-11-10 07:25:26 - INFO     | Run id: 94adefc607524e6da141d3eb10308a75
2023-11-10 07:25:26 - INFO     | Metric(s): {'roc_auc': 0.7566610156276207}

Last Run vs Production¶

What is the metric/performance from the model associated with the last run?

In [3]:
logging.info(f"last run metrics: {experiment.last_run.metrics}")
2023-11-10 07:25:26 - INFO     | last run metrics: {'roc_auc': 0.7566610156276207}

What is the metric/performance of the model in production?

In [4]:
production_run = registry.get_production_run(model_name=config.model_name())
logging.info(f"production run metrics: {production_run.metrics}")
2023-11-10 07:25:26 - INFO     | production run metrics: {'roc_auc': 0.7700760706900486}

Last Run¶

In [5]:
# underlying mlflow object
experiment.last_run.mlflow_entity
Out[5]:
<Run: data=<RunData: metrics={'roc_auc': 0.7566610156276207}, params={'prep__non_numeric__encoder__transformer': "OneHotEncoder(handle_unknown='ignore')",
 'prep__numeric__imputer__transformer': 'SimpleImputer()',
 'prep__numeric__pca__transformer': 'None',
 'prep__numeric__scaler__transformer': 'None'}, tags={'mlflow.log-model.history': '[{"run_id": "94adefc607524e6da141d3eb10308a75", '
                             '"artifact_path": "model", "utc_time_created": '
                             '"2023-11-10 07:25:22.238188", "flavors": '
                             '{"python_function": {"model_path": "model.pkl", '
                             '"predict_fn": "predict", "loader_module": '
                             '"mlflow.sklearn", "python_version": "3.11.6", '
                             '"env": {"conda": "conda.yaml", "virtualenv": '
                             '"python_env.yaml"}}, "sklearn": '
                             '{"pickled_model": "model.pkl", '
                             '"sklearn_version": "1.3.2", '
                             '"serialization_format": "cloudpickle", "code": '
                             'null}}, "model_uuid": '
                             '"94fbca289ba84f87bc8fb874a8c44772", '
                             '"mlflow_version": "2.8.0", "model_size_bytes": '
                             '15631969}]',
 'mlflow.note.content': '2023_11_10_07_24_55',
 'mlflow.runName': '2023_11_10_07_24_55',
 'mlflow.source.git.commit': 'e4a4afc62a952e1fc94d01102f96b08cd2840540',
 'mlflow.source.name': 'source/entrypoints/cli.py',
 'mlflow.source.type': 'LOCAL',
 'mlflow.user': 'root',
 'type': 'BayesSearchCV'}>, info=<RunInfo: artifact_uri='/code/mlflow-artifact-root/1/94adefc607524e6da141d3eb10308a75/artifacts', end_time=1699601123874, experiment_id='1', lifecycle_stage='active', run_id='94adefc607524e6da141d3eb10308a75', run_name='2023_11_10_07_24_55', run_uuid='94adefc607524e6da141d3eb10308a75', start_time=1699601095988, status='FINISHED', user_id='root'>, inputs=<RunInputs: dataset_inputs=[]>>

Load Training & Test Data Info¶

In [6]:
with Timer("Loading training/test datasets"):
    X_train = experiment.last_run.download_artifact(artifact_name='x_train.pkl', read_from=read_pickle)
    X_test = experiment.last_run.download_artifact(artifact_name='x_test.pkl', read_from=read_pickle)
    y_train = experiment.last_run.download_artifact(artifact_name='y_train.pkl', read_from=read_pickle)
    y_test = experiment.last_run.download_artifact(artifact_name='y_test.pkl', read_from=read_pickle)
Timer Started: Loading training/test datasets
Timer Finished (0.01 seconds)
In [7]:
logging.info(f"training X shape: {X_train.shape}")
logging.info(f"training y length: {len(y_train)}")

logging.info(f"test X shape: {X_test.shape}")
logging.info(f"test y length: {len(y_test)}")
2023-11-10 07:25:26 - INFO     | training X shape: (800, 20)
2023-11-10 07:25:26 - INFO     | training y length: 800
2023-11-10 07:25:26 - INFO     | test X shape: (200, 20)
2023-11-10 07:25:26 - INFO     | test y length: 200
In [8]:
np.unique(y_train, return_counts=True)
Out[8]:
(array([0, 1]), array([559, 241]))
In [9]:
train_y_proportion = np.unique(y_train, return_counts=True)[1] \
    / np.sum(np.unique(y_train, return_counts=True)[1])
logging.info(f"balance of y in training: {train_y_proportion}")
2023-11-10 07:25:26 - INFO     | balance of y in training: [0.69875 0.30125]
In [10]:
test_y_proportion = np.unique(y_test, return_counts=True)[1] \
    / np.sum(np.unique(y_test, return_counts=True)[1])
logging.info(f"balance of y in test: {test_y_proportion}")
2023-11-10 07:25:26 - INFO     | balance of y in test: [0.705 0.295]

Cross Validation Results¶

Best Scores/Params¶

In [11]:
results = experiment.last_run.download_artifact(
    artifact_name='experiment.yaml',
    read_from=MLExperimentResults.from_yaml_file
)
logging.info(f"Best Score: {results.best_score}")
logging.info(f"Best Params: {results.best_params}")
2023-11-10 07:25:26 - INFO     | Best Score: 0.7566610156276207
2023-11-10 07:25:26 - INFO     | Best Params: {'model': 'RandomForestClassifier()', 'imputer': 'SimpleImputer()', 'scaler': 'None', 'pca': 'None', 'encoder': 'OneHotEncoder()'}
In [12]:
# Best model from each model-type.
df = results.to_formatted_dataframe(return_style=False, include_rank=True)
df["model_rank"] = df.groupby("model")["roc_auc Mean"].rank(method="first", ascending=False)
df.query('model_rank == 1')
Out[12]:
rank roc_auc Mean roc_auc 95CI.LO roc_auc 95CI.HI model C max_features max_depth n_estimators min_samples_split min_samples_leaf max_samples criterion learning_rate min_child_weight subsample colsample_bytree colsample_bylevel reg_alpha reg_lambda num_leaves imputer scaler pca encoder model_rank
10 1 0.76 0.65 0.86 RandomForestClassifier() NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN SimpleImputer() None None OneHotEncoder() 1.00
2 3 0.75 0.69 0.80 LogisticRegression() 0.00 NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN SimpleImputer(strategy='median') MinMaxScaler() None OneHotEncoder() 1.00
5 7 0.75 0.67 0.83 ExtraTreesClassifier() NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN SimpleImputer() None None OneHotEncoder() 1.00
19 9 0.74 0.64 0.84 XGBClassifier() NaN NaN 1.00 1315.00 NaN NaN NaN NaN 0.02 17.00 0.72 0.53 0.99 0.00 2.78 NaN SimpleImputer() None PCA('mle') CustomOrdinalEncoder() 1.00
21 12 0.74 0.66 0.81 LGBMClassifier() NaN NaN NaN NaN NaN NaN NaN NaN NaN NaN 0.63 0.25 NaN 5.83 44.98 347.00 SimpleImputer(strategy='median') None None CustomOrdinalEncoder() 1.00
In [13]:
results.to_formatted_dataframe(return_style=True,
                               include_rank=True,
                               num_rows=500)
Out[13]:
rank roc_auc Mean roc_auc 95CI.LO roc_auc 95CI.HI model C max_features max_depth n_estimators min_samples_split min_samples_leaf max_samples criterion learning_rate min_child_weight subsample colsample_bytree colsample_bylevel reg_alpha reg_lambda num_leaves imputer scaler pca encoder
1 0.757 0.650 0.864 RandomForestClassifier() <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer() None None OneHotEncoder()
2 0.750 0.646 0.855 RandomForestClassifier() <NA> 0.239 41.000 1,886.000 3.000 15.000 0.864 gini <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer(strategy='most_frequent') None None OneHotEncoder()
3 0.749 0.695 0.804 LogisticRegression() 0.000 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer(strategy='median') MinMaxScaler() None OneHotEncoder()
4 0.749 0.619 0.879 RandomForestClassifier() <NA> 0.583 35.000 1,474.000 22.000 5.000 0.765 entropy <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer(strategy='most_frequent') None PCA('mle') CustomOrdinalEncoder()
5 0.749 0.695 0.803 LogisticRegression() 0.000 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer(strategy='most_frequent') MinMaxScaler() None OneHotEncoder()
6 0.749 0.694 0.804 LogisticRegression() 0.000 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer() MinMaxScaler() PCA('mle') OneHotEncoder()
7 0.748 0.665 0.831 ExtraTreesClassifier() <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer() None None OneHotEncoder()
8 0.744 0.641 0.847 LogisticRegression() <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer() StandardScaler() None OneHotEncoder()
9 0.740 0.643 0.837 XGBClassifier() <NA> <NA> 1.000 1,315.000 <NA> <NA> <NA> <NA> 0.022 17.000 0.716 0.530 0.986 0.002 2.778 <NA> SimpleImputer() None PCA('mle') CustomOrdinalEncoder()
10 0.740 0.640 0.839 RandomForestClassifier() <NA> 0.445 87.000 1,244.000 33.000 27.000 0.795 gini <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer(strategy='most_frequent') None None OneHotEncoder()
11 0.738 0.621 0.855 RandomForestClassifier() <NA> 0.911 74.000 1,265.000 39.000 17.000 0.751 entropy <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer(strategy='most_frequent') None None OneHotEncoder()
12 0.737 0.661 0.813 LGBMClassifier() <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> 0.630 0.248 <NA> 5.830 44.985 347.000 SimpleImputer(strategy='median') None None CustomOrdinalEncoder()
13 0.733 0.597 0.870 LGBMClassifier() <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> 0.732 0.746 <NA> 0.877 47.642 497.000 SimpleImputer() None PCA('mle') CustomOrdinalEncoder()
14 0.732 0.682 0.782 ExtraTreesClassifier() <NA> 0.502 29.000 1,249.000 25.000 35.000 0.855 gini <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer(strategy='median') None None CustomOrdinalEncoder()
15 0.728 0.695 0.760 ExtraTreesClassifier() <NA> 0.135 15.000 1,987.000 10.000 39.000 0.708 gini <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer(strategy='median') None None CustomOrdinalEncoder()
16 0.725 0.635 0.815 ExtraTreesClassifier() <NA> 0.768 54.000 909.000 16.000 30.000 0.762 entropy <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer(strategy='most_frequent') None None OneHotEncoder()
17 0.723 0.623 0.823 ExtraTreesClassifier() <NA> 0.537 2.000 1,275.000 14.000 47.000 0.805 entropy <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer() None None OneHotEncoder()
18 0.722 0.633 0.810 XGBClassifier() <NA> <NA> 20.000 1,733.000 <NA> <NA> <NA> <NA> 0.010 2.000 0.673 0.772 0.881 0.281 2.005 <NA> SimpleImputer(strategy='median') None None OneHotEncoder()
19 0.720 0.628 0.811 XGBClassifier() <NA> <NA> 3.000 1,482.000 <NA> <NA> <NA> <NA> 0.067 18.000 0.889 0.636 0.615 0.000 2.093 <NA> SimpleImputer() None None CustomOrdinalEncoder()
20 0.713 0.604 0.823 LGBMClassifier() <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer() None None OneHotEncoder()
21 0.710 0.663 0.758 LGBMClassifier() <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> 0.429 0.877 <NA> 13.997 35.364 388.000 SimpleImputer() None None CustomOrdinalEncoder()
22 0.702 0.659 0.745 LogisticRegression() 0.000 <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer(strategy='median') MinMaxScaler() None CustomOrdinalEncoder()
23 0.701 0.587 0.814 XGBClassifier() <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer() None None OneHotEncoder()
24 0.693 0.648 0.738 LGBMClassifier() <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> <NA> 0.965 0.241 <NA> 19.400 3.771 281.000 SimpleImputer(strategy='median') None PCA('mle') CustomOrdinalEncoder()
25 0.689 0.557 0.820 XGBClassifier() <NA> <NA> 4.000 1,961.000 <NA> <NA> <NA> <NA> 0.271 3.000 0.671 0.797 0.696 0.000 2.150 <NA> SimpleImputer(strategy='most_frequent') None PCA('mle') OneHotEncoder()
In [14]:
results.to_formatted_dataframe(query='model == "RandomForestClassifier()"', include_rank=True)
Out[14]:
rank roc_auc Mean roc_auc 95CI.LO roc_auc 95CI.HI max_features max_depth n_estimators min_samples_split min_samples_leaf max_samples criterion imputer pca encoder
1 0.757 0.650 0.864 <NA> <NA> <NA> <NA> <NA> <NA> <NA> SimpleImputer() None OneHotEncoder()
2 0.750 0.646 0.855 0.239 41.000 1,886.000 3.000 15.000 0.864 gini SimpleImputer(strategy='most_frequent') None OneHotEncoder()
3 0.749 0.619 0.879 0.583 35.000 1,474.000 22.000 5.000 0.765 entropy SimpleImputer(strategy='most_frequent') PCA('mle') CustomOrdinalEncoder()
4 0.740 0.640 0.839 0.445 87.000 1,244.000 33.000 27.000 0.795 gini SimpleImputer(strategy='most_frequent') None OneHotEncoder()
5 0.738 0.621 0.855 0.911 74.000 1,265.000 39.000 17.000 0.751 entropy SimpleImputer(strategy='most_frequent') None OneHotEncoder()
In [15]:
results.to_formatted_dataframe(query='model == "LogisticRegression()"', include_rank=True)
Out[15]:
rank roc_auc Mean roc_auc 95CI.LO roc_auc 95CI.HI C imputer scaler pca encoder
1 0.749 0.695 0.804 0.000 SimpleImputer(strategy='median') MinMaxScaler() None OneHotEncoder()
2 0.749 0.695 0.803 0.000 SimpleImputer(strategy='most_frequent') MinMaxScaler() None OneHotEncoder()
3 0.749 0.694 0.804 0.000 SimpleImputer() MinMaxScaler() PCA('mle') OneHotEncoder()
4 0.744 0.641 0.847 <NA> SimpleImputer() StandardScaler() None OneHotEncoder()
5 0.702 0.659 0.745 0.000 SimpleImputer(strategy='median') MinMaxScaler() None CustomOrdinalEncoder()

BayesSearchCV Performance Over Time¶

In [16]:
results.plot_performance_across_trials(facet_by='model').show()
In [17]:
results.plot_performance_across_trials(query='model == "RandomForestClassifier()"').show()

Variable Performance Over Time¶

In [18]:
results.plot_parameter_values_across_trials(query='model == "RandomForestClassifier()"').show()

Scatter Matrix¶

In [19]:
# results.plot_scatter_matrix(query='model == "RandomForestClassifier()"',
#                             height=1000, width=1000).show()

Variable Performance - Numeric¶

In [20]:
results.plot_performance_numeric_params(query='model == "RandomForestClassifier()"',
                                        height=800)
In [21]:
results.plot_parallel_coordinates(query='model == "RandomForestClassifier()"').show()

Variable Performance - Non-Numeric¶

In [22]:
results.plot_performance_non_numeric_params(query='model == "RandomForestClassifier()"').show()

In [23]:
results.plot_score_vs_parameter(
    query='model == "RandomForestClassifier()"',
    parameter='max_features',
    size='max_depth',
    color='encoder',
)

In [24]:
# results.plot_parameter_vs_parameter(
#     query='model == "XGBClassifier()"',
#     parameter_x='colsample_bytree',
#     parameter_y='learning_rate',
#     size='max_depth'
# )
In [25]:
# results.plot_parameter_vs_parameter(
#     query='model == "XGBClassifier()"',
#     parameter_x='colsample_bytree',
#     parameter_y='learning_rate',
#     size='imputer'
# )

Last Run - Test Set Performance¶

In [26]:
last_model = experiment.last_run.download_artifact(
    artifact_name='model/model.pkl',
    read_from=read_pickle
)
print(type(last_model.model))
<class 'sklearn.pipeline.Pipeline'>
In [27]:
last_model
Out[27]:
SklearnModelWrapper(model=Pipeline(steps=[('prep',
                                           ColumnTransformer(transformers=[('numeric',
                                                                            Pipeline(steps=[('imputer',
                                                                                             TransformerChooser(transformer=SimpleImputer())),
                                                                                            ('scaler',
                                                                                             TransformerChooser()),
                                                                                            ('pca',
                                                                                             TransformerChooser())]),
                                                                            ['duration',
                                                                             'credit_amount',
                                                                             'installment_commitment',
                                                                             'residence_since',
                                                                             'age',
                                                                             'existing_credits',
                                                                             'num_dependents']),
                                                                           ('n...
                                                                                             TransformerChooser(transformer=OneHotEncoder(handle_unknown='ignore')))]),
                                                                            ['checking_status',
                                                                             'credit_history',
                                                                             'purpose',
                                                                             'savings_status',
                                                                             'employment',
                                                                             'personal_status',
                                                                             'other_parties',
                                                                             'property_magnitude',
                                                                             'other_payment_plans',
                                                                             'housing',
                                                                             'job',
                                                                             'own_telephone',
                                                                             'foreign_worker'])])),
                                          ('model',
                                           RandomForestClassifier(n_estimators=500,
                                                                  random_state=42))]))
In a Jupyter environment, please rerun this cell to show the HTML representation or trust the notebook.
On GitHub, the HTML representation is unable to render, please try loading this page with nbviewer.org.
SklearnModelWrapper(model=Pipeline(steps=[('prep',
                                           ColumnTransformer(transformers=[('numeric',
                                                                            Pipeline(steps=[('imputer',
                                                                                             TransformerChooser(transformer=SimpleImputer())),
                                                                                            ('scaler',
                                                                                             TransformerChooser()),
                                                                                            ('pca',
                                                                                             TransformerChooser())]),
                                                                            ['duration',
                                                                             'credit_amount',
                                                                             'installment_commitment',
                                                                             'residence_since',
                                                                             'age',
                                                                             'existing_credits',
                                                                             'num_dependents']),
                                                                           ('n...
                                                                                             TransformerChooser(transformer=OneHotEncoder(handle_unknown='ignore')))]),
                                                                            ['checking_status',
                                                                             'credit_history',
                                                                             'purpose',
                                                                             'savings_status',
                                                                             'employment',
                                                                             'personal_status',
                                                                             'other_parties',
                                                                             'property_magnitude',
                                                                             'other_payment_plans',
                                                                             'housing',
                                                                             'job',
                                                                             'own_telephone',
                                                                             'foreign_worker'])])),
                                          ('model',
                                           RandomForestClassifier(n_estimators=500,
                                                                  random_state=42))]))
Pipeline(steps=[('prep',
                 ColumnTransformer(transformers=[('numeric',
                                                  Pipeline(steps=[('imputer',
                                                                   TransformerChooser(transformer=SimpleImputer())),
                                                                  ('scaler',
                                                                   TransformerChooser()),
                                                                  ('pca',
                                                                   TransformerChooser())]),
                                                  ['duration', 'credit_amount',
                                                   'installment_commitment',
                                                   'residence_since', 'age',
                                                   'existing_credits',
                                                   'num_dependents']),
                                                 ('non_numeric',
                                                  Pipeline(steps...,
                                                                   TransformerChooser(transformer=OneHotEncoder(handle_unknown='ignore')))]),
                                                  ['checking_status',
                                                   'credit_history', 'purpose',
                                                   'savings_status',
                                                   'employment',
                                                   'personal_status',
                                                   'other_parties',
                                                   'property_magnitude',
                                                   'other_payment_plans',
                                                   'housing', 'job',
                                                   'own_telephone',
                                                   'foreign_worker'])])),
                ('model',
                 RandomForestClassifier(n_estimators=500, random_state=42))])
ColumnTransformer(transformers=[('numeric',
                                 Pipeline(steps=[('imputer',
                                                  TransformerChooser(transformer=SimpleImputer())),
                                                 ('scaler',
                                                  TransformerChooser()),
                                                 ('pca',
                                                  TransformerChooser())]),
                                 ['duration', 'credit_amount',
                                  'installment_commitment', 'residence_since',
                                  'age', 'existing_credits',
                                  'num_dependents']),
                                ('non_numeric',
                                 Pipeline(steps=[('encoder',
                                                  TransformerChooser(transformer=OneHotEncoder(handle_unknown='ignore')))]),
                                 ['checking_status', 'credit_history',
                                  'purpose', 'savings_status', 'employment',
                                  'personal_status', 'other_parties',
                                  'property_magnitude', 'other_payment_plans',
                                  'housing', 'job', 'own_telephone',
                                  'foreign_worker'])])
['duration', 'credit_amount', 'installment_commitment', 'residence_since', 'age', 'existing_credits', 'num_dependents']
TransformerChooser(transformer=SimpleImputer())
SimpleImputer()
SimpleImputer()
TransformerChooser()
TransformerChooser()
['checking_status', 'credit_history', 'purpose', 'savings_status', 'employment', 'personal_status', 'other_parties', 'property_magnitude', 'other_payment_plans', 'housing', 'job', 'own_telephone', 'foreign_worker']
TransformerChooser(transformer=OneHotEncoder(handle_unknown='ignore'))
OneHotEncoder(handle_unknown='ignore')
OneHotEncoder(handle_unknown='ignore')
RandomForestClassifier(n_estimators=500, random_state=42)
In [28]:
test_predictions = last_model.predict(X_test)
test_predictions[0:10]
Out[28]:
array([0.388, 0.506, 0.724, 0.368, 0.056, 0.472, 0.076, 0.47 , 0.18 ,
       0.23 ])
In [29]:
evaluator = hlp.sklearn_eval.TwoClassEvaluator(
    actual_values=y_test,
    predicted_scores=test_predictions,
    score_threshold=0.37
)
In [30]:
evaluator.plot_actual_vs_predict_histogram()
In [31]:
evaluator.plot_confusion_matrix()
No description has been provided for this image
In [32]:
evaluator.all_metrics_df(return_style=True,
                         dummy_classifier_strategy=['prior', 'constant'],
                         round_by=3)
Out[32]:
  Score Dummy (prior) Dummy (constant) Explanation
AUC 0.823 0.500 0.500 Area under the ROC curve (true pos. rate vs false pos. rate); ranges from 0.5 (purely random classifier) to 1.0 (perfect classifier)
True Positive Rate 0.746 0.000 1.000 74.6% of positive instances were correctly identified.; i.e. 44 "Positive Class" labels were correctly identified out of 59 instances; a.k.a Sensitivity/Recall
True Negative Rate 0.801 1.000 0.000 80.1% of negative instances were correctly identified.; i.e. 113 "Negative Class" labels were correctly identified out of 141 instances
False Positive Rate 0.199 0.000 1.000 19.9% of negative instances were incorrectly identified as positive; i.e. 28 "Negative Class" labels were incorrectly identified as "Positive Class", out of 141 instances
False Negative Rate 0.254 1.000 0.000 25.4% of positive instances were incorrectly identified as negative; i.e. 15 "Positive Class" labels were incorrectly identified as "Negative Class", out of 59 instances
Positive Predictive Value 0.611 0.000 0.295 When the model claims an instance is positive, it is correct 61.1% of the time; i.e. out of the 72 times the model predicted "Positive Class", it was correct 44 times; a.k.a precision
Negative Predictive Value 0.883 0.705 0.000 When the model claims an instance is negative, it is correct 88.3% of the time; i.e. out of the 128 times the model predicted "Negative Class", it was correct 113 times
F1 Score 0.672 0.000 0.456 The F1 score can be interpreted as a weighted average of the precision and recall, where an F1 score reaches its best value at 1 and worst score at 0.
Precision/Recall AUC 0.662 0.295 0.295 Precision/Recall AUC is calculated with `average_precision` which summarizes a precision-recall curve as the weighted mean of precisions achieved at each threshold. See sci-kit learn documentation for caveats.
Accuracy 0.785 0.705 0.295 78.5% of instances were correctly identified
Error Rate 0.215 0.295 0.705 21.5% of instances were incorrectly identified
% Positive 0.295 0.295 0.295 29.5% of the data are positive; i.e. out of 200 total observations; 59 are labeled as "Positive Class"
Total Observations 200 200 200 There are 200 total observations; i.e. sample size
In [33]:
evaluator.plot_roc_auc_curve().show()
In [34]:
evaluator.plot_precision_recall_auc_curve().show()
In [35]:
evaluator.plot_threshold_curves(score_threshold_range=(0.1, 0.7)).show()
In [36]:
evaluator.plot_precision_recall_tradeoff(score_threshold_range=(0.1, 0.6)).show()
In [37]:
evaluator.calculate_lift_gain(return_style=True)
/usr/local/lib/python3.11/site-packages/helpsk/sklearn_eval.py:2480: FutureWarning:

The default of observed=False is deprecated and will be changed to True in a future version of pandas. Pass observed=False to retain current behavior or observed=True to adopt the future default and silence this warning.

Out[37]:
  Gain Lift
Percentile    
5 0.14 2.71
10 0.24 2.37
15 0.37 2.49
20 0.49 2.46
25 0.54 2.17
30 0.66 2.20
35 0.71 2.03
40 0.75 1.86
45 0.80 1.77
50 0.83 1.66
55 0.85 1.54
60 0.86 1.44
65 0.90 1.38
70 0.93 1.33
75 0.95 1.27
80 0.97 1.21
85 0.98 1.16
90 1.00 1.11
95 1.00 1.05
100 1.00 1.00

Production Model - Test Set Performance¶

In [38]:
production_model = production_run.download_artifact(
    artifact_name='model/model.pkl',
    read_from=read_pickle
)
print(type(production_model.model))
<class 'sklearn.pipeline.Pipeline'>
In [39]:
production_model
Out[39]:
SklearnModelWrapper(model=Pipeline(steps=[('prep',
                                           ColumnTransformer(transformers=[('numeric',
                                                                            Pipeline(steps=[('imputer',
                                                                                             TransformerChooser(transformer=SimpleImputer(strategy='median'))),
                                                                                            ('scaler',
                                                                                             TransformerChooser()),
                                                                                            ('pca',
                                                                                             TransformerChooser(transformer=PCA(n_components='mle')))]),
                                                                            ['duration',
                                                                             'credit_amount',
                                                                             'installment_commitment',
                                                                             'residence_si...
                                                                             'personal_status',
                                                                             'other_parties',
                                                                             'property_magnitude',
                                                                             'other_payment_plans',
                                                                             'housing',
                                                                             'job',
                                                                             'own_telephone',
                                                                             'foreign_worker'])])),
                                          ('model',
                                           ExtraTreesClassifier(bootstrap=True,
                                                                criterion='entropy',
                                                                max_depth=99,
                                                                max_features=0.031837350792579364,
                                                                max_samples=0.9248344222191298,
                                                                min_samples_leaf=4,
                                                                min_samples_split=16,
                                                                n_estimators=1235,
                                                                random_state=42))]))
In a Jupyter environment, please rerun this cell to show the HTML representation or trust the notebook.
On GitHub, the HTML representation is unable to render, please try loading this page with nbviewer.org.
SklearnModelWrapper(model=Pipeline(steps=[('prep',
                                           ColumnTransformer(transformers=[('numeric',
                                                                            Pipeline(steps=[('imputer',
                                                                                             TransformerChooser(transformer=SimpleImputer(strategy='median'))),
                                                                                            ('scaler',
                                                                                             TransformerChooser()),
                                                                                            ('pca',
                                                                                             TransformerChooser(transformer=PCA(n_components='mle')))]),
                                                                            ['duration',
                                                                             'credit_amount',
                                                                             'installment_commitment',
                                                                             'residence_si...
                                                                             'personal_status',
                                                                             'other_parties',
                                                                             'property_magnitude',
                                                                             'other_payment_plans',
                                                                             'housing',
                                                                             'job',
                                                                             'own_telephone',
                                                                             'foreign_worker'])])),
                                          ('model',
                                           ExtraTreesClassifier(bootstrap=True,
                                                                criterion='entropy',
                                                                max_depth=99,
                                                                max_features=0.031837350792579364,
                                                                max_samples=0.9248344222191298,
                                                                min_samples_leaf=4,
                                                                min_samples_split=16,
                                                                n_estimators=1235,
                                                                random_state=42))]))
Pipeline(steps=[('prep',
                 ColumnTransformer(transformers=[('numeric',
                                                  Pipeline(steps=[('imputer',
                                                                   TransformerChooser(transformer=SimpleImputer(strategy='median'))),
                                                                  ('scaler',
                                                                   TransformerChooser()),
                                                                  ('pca',
                                                                   TransformerChooser(transformer=PCA(n_components='mle')))]),
                                                  ['duration', 'credit_amount',
                                                   'installment_commitment',
                                                   'residence_since', 'age',
                                                   'existing_credi...
                                                   'personal_status',
                                                   'other_parties',
                                                   'property_magnitude',
                                                   'other_payment_plans',
                                                   'housing', 'job',
                                                   'own_telephone',
                                                   'foreign_worker'])])),
                ('model',
                 ExtraTreesClassifier(bootstrap=True, criterion='entropy',
                                      max_depth=99,
                                      max_features=0.031837350792579364,
                                      max_samples=0.9248344222191298,
                                      min_samples_leaf=4, min_samples_split=16,
                                      n_estimators=1235, random_state=42))])
ColumnTransformer(transformers=[('numeric',
                                 Pipeline(steps=[('imputer',
                                                  TransformerChooser(transformer=SimpleImputer(strategy='median'))),
                                                 ('scaler',
                                                  TransformerChooser()),
                                                 ('pca',
                                                  TransformerChooser(transformer=PCA(n_components='mle')))]),
                                 ['duration', 'credit_amount',
                                  'installment_commitment', 'residence_since',
                                  'age', 'existing_credits',
                                  'num_dependents']),
                                ('non_numeric',
                                 Pipeline(steps=[('encoder',
                                                  TransformerChooser(transformer=CustomOrdinalEncoder()))]),
                                 ['checking_status', 'credit_history',
                                  'purpose', 'savings_status', 'employment',
                                  'personal_status', 'other_parties',
                                  'property_magnitude', 'other_payment_plans',
                                  'housing', 'job', 'own_telephone',
                                  'foreign_worker'])])
['duration', 'credit_amount', 'installment_commitment', 'residence_since', 'age', 'existing_credits', 'num_dependents']
TransformerChooser(transformer=SimpleImputer(strategy='median'))
SimpleImputer(strategy='median')
SimpleImputer(strategy='median')
TransformerChooser()
TransformerChooser(transformer=PCA(n_components='mle'))
PCA(n_components='mle')
PCA(n_components='mle')
['checking_status', 'credit_history', 'purpose', 'savings_status', 'employment', 'personal_status', 'other_parties', 'property_magnitude', 'other_payment_plans', 'housing', 'job', 'own_telephone', 'foreign_worker']
TransformerChooser(transformer=CustomOrdinalEncoder())
CustomOrdinalEncoder()
CustomOrdinalEncoder()
ExtraTreesClassifier(bootstrap=True, criterion='entropy', max_depth=99,
                     max_features=0.031837350792579364,
                     max_samples=0.9248344222191298, min_samples_leaf=4,
                     min_samples_split=16, n_estimators=1235, random_state=42)
In [40]:
test_predictions = production_model.predict(X_test)
test_predictions[0:10]
Out[40]:
array([0.32794716, 0.32893009, 0.37430263, 0.3052219 , 0.23870015,
       0.31131838, 0.24759746, 0.33864031, 0.23092148, 0.24922654])
In [41]:
evaluator = hlp.sklearn_eval.TwoClassEvaluator(
    actual_values=y_test,
    predicted_scores=test_predictions,
    score_threshold=0.37
)
In [42]:
evaluator.plot_actual_vs_predict_histogram()
In [43]:
evaluator.plot_confusion_matrix()
No description has been provided for this image
In [44]:
evaluator.all_metrics_df(return_style=True,
                         dummy_classifier_strategy=['prior', 'constant'],
                         round_by=3)
Out[44]:
  Score Dummy (prior) Dummy (constant) Explanation
AUC 0.781 0.500 0.500 Area under the ROC curve (true pos. rate vs false pos. rate); ranges from 0.5 (purely random classifier) to 1.0 (perfect classifier)
True Positive Rate 0.169 0.000 1.000 16.9% of positive instances were correctly identified.; i.e. 10 "Positive Class" labels were correctly identified out of 59 instances; a.k.a Sensitivity/Recall
True Negative Rate 0.957 1.000 0.000 95.7% of negative instances were correctly identified.; i.e. 135 "Negative Class" labels were correctly identified out of 141 instances
False Positive Rate 0.043 0.000 1.000 4.3% of negative instances were incorrectly identified as positive; i.e. 6 "Negative Class" labels were incorrectly identified as "Positive Class", out of 141 instances
False Negative Rate 0.831 1.000 0.000 83.1% of positive instances were incorrectly identified as negative; i.e. 49 "Positive Class" labels were incorrectly identified as "Negative Class", out of 59 instances
Positive Predictive Value 0.625 0.000 0.295 When the model claims an instance is positive, it is correct 62.5% of the time; i.e. out of the 16 times the model predicted "Positive Class", it was correct 10 times; a.k.a precision
Negative Predictive Value 0.734 0.705 0.000 When the model claims an instance is negative, it is correct 73.4% of the time; i.e. out of the 184 times the model predicted "Negative Class", it was correct 135 times
F1 Score 0.267 0.000 0.456 The F1 score can be interpreted as a weighted average of the precision and recall, where an F1 score reaches its best value at 1 and worst score at 0.
Precision/Recall AUC 0.621 0.295 0.295 Precision/Recall AUC is calculated with `average_precision` which summarizes a precision-recall curve as the weighted mean of precisions achieved at each threshold. See sci-kit learn documentation for caveats.
Accuracy 0.725 0.705 0.295 72.5% of instances were correctly identified
Error Rate 0.275 0.295 0.705 27.5% of instances were incorrectly identified
% Positive 0.295 0.295 0.295 29.5% of the data are positive; i.e. out of 200 total observations; 59 are labeled as "Positive Class"
Total Observations 200 200 200 There are 200 total observations; i.e. sample size
In [45]:
evaluator.plot_roc_auc_curve().show()
In [46]:
evaluator.plot_precision_recall_auc_curve().show()
In [47]:
evaluator.plot_threshold_curves(score_threshold_range=(0.1, 0.7)).show()
In [48]:
evaluator.plot_precision_recall_tradeoff(score_threshold_range=(0.1, 0.6)).show()
In [49]:
evaluator.calculate_lift_gain(return_style=True)
/usr/local/lib/python3.11/site-packages/helpsk/sklearn_eval.py:2480: FutureWarning:

The default of observed=False is deprecated and will be changed to True in a future version of pandas. Pass observed=False to retain current behavior or observed=True to adopt the future default and silence this warning.

Out[49]:
  Gain Lift
Percentile    
5 0.17 3.39
10 0.20 2.03
15 0.34 2.26
20 0.44 2.20
25 0.49 1.97
30 0.56 1.86
35 0.63 1.79
40 0.69 1.74
45 0.76 1.69
50 0.80 1.59
55 0.83 1.51
60 0.85 1.41
65 0.86 1.33
70 0.93 1.33
75 0.95 1.27
80 0.97 1.21
85 0.98 1.16
90 1.00 1.11
95 1.00 1.05
100 1.00 1.00